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Ldec_2.0

Organism name:
Leptinotarsa decemlineata (Colorado potato beetle)
Infraspecific name:
Strain: Imidocloprid resistant
Sex:
female
BioSample:
SAMN02376991
BioProject:
PRJNA171749
Submitter:
The i5k Initiative
Date:
2017/10/31
Assembly level:
Scaffold
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_000500325.2 (latest)
RefSeq assembly accession:
GCF_000500325.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
AYNB02
Assembly method:
AllPaths v. 35218; ATLAS-link v. 1.0; ATLAS-gapfill v. 2.0; redundans v. 0.12c
Expected final version:
no
Genome coverage:
52.3x
Sequencing technology:
Illumina HiSeq

IDs: 1424361 [UID] 5602738 [GenBank] 5685148 [RefSeq]

See Genome Information for Leptinotarsa decemlineata

History (Show revision history)

Global statistics

Total sequence length641,992,784
Total ungapped length633,933,064
Gaps between scaffolds0
Number of scaffolds26,908
Scaffold N50139,046
Scaffold L501,179
Number of contigs45,556
Contig N5046,596
Contig L503,600
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)45,556

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced641,992,78426,908633,933,064139,04618,6480
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