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PanTig1.0

Organism name:
Panthera tigris altaica (Amur tiger)
Isolate:
TaeGuk
Sex:
male
BioSample:
SAMN02086964
Submitter:
Personal Genomics Institute
Date:
2013/09/06
Assembly level:
Scaffold
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_000464555.1 (latest)
RefSeq assembly accession:
GCF_000464555.1 (latest)
RefSeq assembly and GenBank assembly identical:
no (hide details)
  • Only in RefSeq: chromosome MT.
  • Data displayed for RefSeq version
WGS Project:
ATCQ01
Assembly method:
SOAPdenovo v. 08-Jul-2011
Genome coverage:
99x
Sequencing technology:
Illumina HiSeq 2000

IDs: 62771 [UID] 779488 [GenBank] 957978 [RefSeq]

See Genome Information for Panthera tigris

History (Show revision history)

Global statistics

Total sequence length2,391,082,183
Total assembly gap length58,232,500
Gaps between scaffolds0
Number of scaffolds1,479
Scaffold N508,860,407
Scaffold L5087
Number of contigs157,032
Contig N5030,032
Contig L5022,834
Total number of chromosomes and plasmids1

Supplemental Content

PubMed articles for this assembly

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
non-nuclear
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced2,391,065,1931,4782,332,832,6938,860,407155,5530
MoleculeTotal
Length
Mitochondrion MT16,990
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