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PanTig1.0

Organism name:
Panthera tigris altaica (Amur tiger)
Isolate:
TaeGuk
Sex:
male
BioSample:
SAMN02086964
BioProject:
PRJNA182708
Submitter:
Personal Genomics Institute
Date:
2013/09/06
Assembly level:
Scaffold
Genome representation:
full
GenBank assembly accession:
GCA_000464555.1 (latest)
RefSeq assembly accession:
GCF_000464555.1 (suppressed), see latest assembly
RefSeq assembly and GenBank assembly identical:
no (hide details)
  • Only in RefSeq: chromosome MT (in non-nuclear assembly-unit)
  • Data displayed for GenBank version
WGS Project:
ATCQ01
Assembly method:
SOAPdenovo v. 08-Jul-2011
Genome coverage:
99x
Sequencing technology:
Illumina HiSeq 2000

IDs: 62771 [UID] 779488 [GenBank] 957978 [RefSeq]

See Genome Information for Panthera tigris

There are 5 assemblies for this organism

See more

History (Show revision history)

Comment

Global statistics

Total sequence length2,391,065,193
Total ungapped length2,332,832,693
Gaps between scaffolds0
Number of scaffolds1,478
Scaffold N508,860,407
Scaffold L5087
Number of contigs157,031
Contig N5030,032
Contig L5022,834
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)157,031

Supplemental Content

PubMed articles for this assembly

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced2,391,065,1931,4782,332,832,6938,860,407155,5530
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