U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Download Assembly



Try the new Datasets Genome page

Lipotes_vexillifer_v1

Organism name:
Lipotes vexillifer (Yangtze River dolphin)
BioSample:
SAMN02953859
BioProject:
PRJNA174066
Submitter:
BGI
Date:
2013/07/31
Assembly level:
Scaffold
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_000442215.1 (latest)
RefSeq assembly accession:
GCF_000442215.1 (latest)
RefSeq assembly and GenBank assembly identical:
no (hide details)
  • Only in RefSeq: chromosome MT (in non-nuclear assembly-unit)
  • Data displayed for RefSeq version
WGS Project:
AUPI01
Assembly method:
SOAPdenovo v. 2.01
Genome coverage:
115x
Sequencing technology:
Illumina Hiseq 2000

IDs: 48541 [UID] 754378 [GenBank] 976498 [RefSeq]

See Genome Information for Lipotes vexillifer

History (Show revision history)

Comment

Global statistics

Total sequence length2,429,212,129
Total ungapped length2,397,016,190
Gaps between scaffolds0
Number of scaffolds30,713
Scaffold N502,419,148
Scaffold L50299
Number of contigs155,510
Contig N5031,902
Contig L5022,718
Total number of chromosomes and plasmids1
Number of component sequences (WGS or clone)155,510

Supplemental Content

PubMed articles for this assembly

Recent activity

Your browsing activity is temporarily unavailable.

Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
non-nuclear
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced2,429,195,73730,7122,396,999,7982,419,148124,7970
MoleculeTotal
Length
Mitochondrion MT16,392
Support Center