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C_griseus_v1.0

Organism name:
Cricetulus griseus (Chinese hamster)
BioSample:
SAMN02981459
Submitter:
Beijing Genomics Institution-shenzhen
Date:
2013/07/12
Synonyms:
criGri1
Assembly level:
Scaffold
Genome representation:
full
GenBank assembly accession:
GCA_000419365.1 (latest)
RefSeq assembly accession:
GCF_000419365.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
AMDS01
Assembly method:
SOAPdenovo v. 2.2
Genome coverage:
89.1x
Sequencing technology:
Illumina HiSeq

IDs: 40911 [UID] 734148 [GenBank] 1009148 [RefSeq]

See Genome Information for Cricetulus griseus

There are 3 assemblies for this organism

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History (Show revision history)

Global statistics

Total sequence length2,360,130,144
Total assembly gap length58,820,511
Gaps between scaffolds0
Number of scaffolds52,710
Scaffold N501,558,295
Scaffold L50450
Number of contigs218,862
Contig N5027,129
Contig L5025,880
Total number of chromosomes and plasmids0

Supplemental Content

PubMed articles for this assembly

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced2,360,130,14452,7102,301,309,6331,558,295166,1520
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