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ASM36736v1

Organism name:
Streptomyces prunicolor NBRC 13075 (high G+C Gram-positive bacteria)
Taxonomy check:
OK
Infraspecific name:
Strain: NBRC 13075
BioSample:
SAMD00041815
BioProject:
PRJDB1071
Submitter:
National Institute of Technology and Evaluation
Date:
2013/04/12
Assembly type:
na
Assembly level:
Contig
Genome representation:
full
RefSeq category:
representative genome
Relation to type material:
assembly from type material
GenBank assembly accession:
GCA_000367365.1 (latest)
RefSeq assembly accession:
GCF_000367365.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
BARF01
Assembly method:
Newbler v. 2.6
Genome coverage:
77x
Sequencing technology:
454 GS-FLX Titanium;Illumina HiSeq 1000

IDs: 640518 [UID] 591828 [GenBank] 640518 [RefSeq]

See Genome Information for Streptomyces prunicolor

History (Show revision history)

Comment


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Global statistics

Total sequence length11,760,649
Total ungapped length11,760,649
Number of contigs202
Contig N50124,739
Contig L5029
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)202

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Contig
Count
Ungapped
Length
Contig
N50
Spanned
Gaps
Unspanned
Gaps
unplaced11,760,64920211,760,649124,73900

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Streptomyces prunicolor NBRC 13075Streptomyces prunicolor

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
samena

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_000376565.1Streptomyces hokutonensistype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared typenanana
Best-match type90.9666.1665.78

ANI result

Taxonomy check statusBest match statusComment
OKbelow-threshold-mismatchAssembly is the type-strain, mismatch is within genus and expected
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