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Cocsa1

Organism name:
Bipolaris sorokiniana ND90Pr (ascomycete fungi)
Infraspecific name:
Strain: ND90Pr
BioSample:
SAMN02981285
BioProject:
PRJNA53923
Submitter:
JGI
Date:
2013/02/19
Assembly level:
Scaffold
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_000338995.1 (latest)
RefSeq assembly accession:
GCF_000338995.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
AEIN01
Assembly method:
Newbler v. 2.5
Genome coverage:
42.43x
Sequencing technology:
Sanger; 454; Illumina

IDs: 541838 [UID] 541838 [GenBank] 1039058 [RefSeq]

See Genome Information for Bipolaris sorokiniana

There are 10 assemblies for this organism

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History (Show revision history)

Comment

URL -- http://genome.jgi.doe.gov/Cocsa1
JGI Project ID: 53923
The DNA was provided by Shaobin Zhong(shaobin.zhong@ndsu.edu)
The strain is available from shaobin.zhong@ndsu.edu
Contacts: Shaobin Zhong (shaobin.zhong@ndsu.edu)
Assembly and annotation done by JGI.
The JGI and collaborators endorse the principles for the distribution and use of large scale ... sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis.
(http://www.genome.gov/page.cfm?pageID=10506376)  more

Global statistics

Total sequence length34,409,167
Total ungapped length33,212,626
Gaps between scaffolds0
Number of scaffolds154
Scaffold N501,789,485
Scaffold L507
Number of contigs504
Contig N50243,393
Contig L5043
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)503

Supplemental Content

PubMed articles for this assembly

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced34,409,16715433,212,6261,789,4853500