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ASM33207v2

Organism name:
Synechocystis sp. PCC 7509 (cyanobacteria)
Infraspecific name:
Strain: PCC 7509
BioSample:
SAMN02261355
BioProject:
PRJNA159501
Submitter:
JGI
Date:
2014/02/06
Assembly level:
Scaffold
Genome representation:
full
GenBank assembly accession:
GCA_000332075.2 (latest)
RefSeq assembly accession:
GCF_000332075.2 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
ALVU02
Assembly method:
Velvet v. 1.1.05; ALLPATHS v. r38445; Phrap v. 4.24
Genome coverage:
Unknown
Sequencing technology:
Unknown

IDs: 115131 [UID] 938868 [GenBank] 1130018 [RefSeq]

See Genome Information for Synechocystis sp. PCC 7509

History (Show revision history)

Comment

URL -- http://www.jgi.doe.gov
JGI Project ID: 402425
Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov)
Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov)
 Tanja Woyke (microbe@cuba.jgi-psf.org)
Whole genome sequencing and draft assembly at JGI-PGF
Annotation by JGI-ORNL
The JGI and collaborators endorse the principles for the ... distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis.
(http://www.genome.gov/page.cfm?pageID=10506376)
Full annotations are available from IMG  more

Global statistics

Total sequence length4,908,825
Total ungapped length4,908,425
Gaps between scaffolds0
Number of scaffolds4
Scaffold N504,225,608
Scaffold L501
Number of contigs8
Contig N504,225,608
Contig L501
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)8

Supplemental Content

PubMed articles for this assembly

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced4,908,82544,908,4254,225,60840
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