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Oros_1.0

Organism name:
Odobenus rosmarus divergens (Pacific walrus)
Isolate:
Ivan
Sex:
male
BioSample:
SAMN01180787
BioProject:
PRJNA167474
Submitter:
Marine mammals
Date:
2013/01/16
Assembly level:
Scaffold
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_000321225.1 (latest)
RefSeq assembly accession:
GCF_000321225.1 (latest)
RefSeq assembly and GenBank assembly identical:
no (hide details)
  • Only in RefSeq: chromosome MT (in non-nuclear assembly-unit)
  • Data displayed for RefSeq version
WGS Project:
ANOP01
Assembly method:
AllPaths v. 41070; Atlas-link v. 1.0; Atlas-gapfill v. 2.2
Genome coverage:
200.0x
Sequencing technology:
Illumina

IDs: 525008 [UID] 525008 [GenBank] 558608 [RefSeq]

See Genome Information for Odobenus rosmarus

History (Show revision history)

Comment

This work is a collaboration with Centre for GeoGenetics, Natural History Museum of Denmark, University of Copenhagen, Denmark

Global statistics

Total sequence length2,400,150,193
Total ungapped length2,300,252,077
Gaps between scaffolds0
Number of scaffolds3,893
Scaffold N502,616,778
Scaffold L50269
Number of contigs70,656
Contig N5089,951
Contig L507,314
Total number of chromosomes and plasmids1
Number of component sequences (WGS or clone)70,656

Supplemental Content

PubMed articles for this assembly

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
non-nuclear
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced2,400,133,6283,8922,300,235,5122,616,77866,7630
MoleculeTotal
Length
Mitochondrion MT16,565
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