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ASM25989v1

Organism name:
Streptomyces sp. TOR3209 (high G+C Gram-positive bacteria)
Taxonomy check:
OK
Infraspecific name:
Strain: TOR3209
BioSample:
SAMN02469879
BioProject:
PRJNA71265
Submitter:
Institute of Genetics and Physiology?Hebei Academy of Agriculture and Forestry Sciences
Date:
2011/12/05
Assembly type:
na
Assembly level:
Contig
Genome representation:
full
GenBank assembly accession:
GCA_000259895.1 (latest)
RefSeq assembly accession:
GCF_000259895.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
AGNH01
Assembly method:
SOAPdenovo v. 1.04
Genome coverage:
164x
Sequencing technology:
Illumina HiSeq 2000

IDs: 648078 [UID] 373758 [GenBank] 648078 [RefSeq]

See Genome Information for Streptomyces sp. TOR3209

History (Show revision history)

Comment

Source DNA or bacteria is available from Institute of Genetics and Physiology, Hebei Academy of Agriculture and Forestry Sciences.

Global statistics

Total sequence length8,013,370
Total ungapped length8,013,370
Number of contigs729
Contig N5020,147
Contig L50135
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)729

Supplemental Content

PubMed articles for this assembly

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Contig
Count
Ungapped
Length
Contig
N50
Spanned
Gaps
Unspanned
Gaps
unplaced8,013,3707298,013,37020,14700

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Streptomyces sp. TOR3209Streptomyces sp. TOR3209

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
no-typeno-type

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_014650135.1Streptomyces plicatussuspected-type

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared typenanana
Best-match type98.9691.7987.90

ANI result

Taxonomy check statusBest match statusComment
OKgenus-matchna
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