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ASM24016v1

Organism name:
Streptantibioticus cattleyicolor NRRL 8057 = DSM 46488 (high G+C Gram-positive bacteria)
Taxonomy check:
OK
Infraspecific name:
Strain: DSM 46488
BioSample:
SAMN02603879
BioProject:
PRJNA78941
Submitter:
State Key Laboratory of Microbial Metabolism, Shanghai Jiaotong University
Date:
2011/12/27
Assembly type:
na
Assembly level:
Complete Genome
Genome representation:
full
Relation to type material:
assembly from type material
GenBank assembly accession:
GCA_000240165.1 (latest)
RefSeq assembly accession:
GCF_000240165.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes

IDs: 376848 [UID] 322848 [GenBank] 376848 [RefSeq]

See Genome Information for Streptantibioticus cattleyicolor

Pathogen Detection Resources

There are 3 assemblies for this organism

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History (Show revision history)

Comment

Genome-Annotation-Data

##Genome-Annotation-Data-START##
Annotation Provider::NCBI RefSeq
Annotation Date::11/20/2022 15:23:36
Annotation Pipeline::NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
Annotation Method::Best-placed reference protein set; GeneMarkS-2+
Annotation Software revision::6.3
Features Annotated::Gene; CDS; rRNA; tRNA; ncRNA
Genes (total)::7,235
CDSs (total)::7,147
Genes (coding)::6,961
CDSs (with protein)::6,961
Genes (RNA)::88
rRNAs::6, 6, 6 (5S, 16S, 23S)
complete rRNAs::6, 6, 6 (5S, 16S, 23S)
tRNAs::67
ncRNAs::3
Pseudo Genes (total)::187
CDSs (without protein)::186
Pseudo Genes (ambiguous residues)::0 of 187
Pseudo Genes (frameshifted)::80 of 187
Pseudo Genes (incomplete)::126 of 187
Pseudo Genes (internal stop)::10 of 187
Pseudo Genes (multiple problems)::29 of 187
CRISPR Arrays::2
##Genome-Annotation-Data-END##

Global statistics

Total sequence length8,095,515
Total ungapped length8,095,515
Total number of chromosomes and plasmids2

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Assembly Information

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
Assembly Unit: Primary Assembly (GCF_000240175.1)
Molecule nameGenBank sequenceRefSeq sequence
Chromosome CP003219.1=NC_017586.1
Plasmid pSCATTCP003229.1=NC_017585.1

Assembly statistics

MoleculeTotal
Length
All8,095,515
Chromosome 6,282,967
Plasmid pSCATT1,812,548

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Streptantibioticus cattleyicolor NRRL 8057 = DSM 46488Streptantibioticus cattleyicolor

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
GCA_000237305.1Streptantibioticus cattleyicolor NRRL 8057 = DSM 46488type

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_000237305.1Streptantibioticus cattleyicolortype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared type99.9999.9399.97
Best-match type99.9999.9399.97

ANI result

Taxonomy check statusBest match statusComment
OKspecies-matchna
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