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MusPutFurMale1.0

Description:
Genome assembly of a male ferret
Organism name:
Mustela putorius furo (domestic ferret)
Infraspecific name:
Breed: Sable
Isolate:
ID#4666
Sex:
male
BioSample:
SAMN00761641
BioProject:
PRJNA78213
Submitter:
Broad Institute
Date:
2011/12/21
Assembly level:
Scaffold
Genome representation:
full
Excluded from RefSeq:
  • superseded by newer assembly for species
GenBank assembly accession:
GCA_000239315.1 (latest)
RefSeq assembly accession:
GCF_000239315.1 (suppressed)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
AGTQ01
Assembly method:
AllPaths v. R37658
Genome coverage:
91.5x
Sequencing technology:
Illumina HiSeq

IDs: 322038 [UID] 322038 [GenBank] 688798 [RefSeq]

See Genome Information for Mustela putorius

There are 25 assemblies for this organism

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History (Show revision history)

Comment

Sequenced and assembled at the Broad Institute. The sequenced animal was purchased from Marshall Farms and prepared by Dr. John Englehardt, University of Iowa. This assembly is of a male ferret, distinct from the female assembly MusPutFur1.0 (AEYP00000000) This ... project was completed as part of developing de novo whole genome sequencing and assembly processes using short-read technologies.  more

Global statistics

Total sequence length2,400,181,698
Total ungapped length2,325,201,281
Gaps between scaffolds0
Number of scaffolds4,245
Scaffold N509,567,452
Scaffold L5072
Number of contigs76,915
Contig N5066,755
Contig L509,959
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)76,915

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced2,400,181,6984,2452,325,201,2819,567,45272,6700
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