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v1.0

Organism name:
Dictyostelium purpureum (cellular slime molds)
Infraspecific name:
Strain: QSDP1
BioSample:
SAMN02744064
BioProject:
PRJNA30991
Submitter:
US DOE Joint Genome Institute (JGI-PGF)
Date:
2011/03/02
Assembly level:
Scaffold
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_000190715.1 (latest)
RefSeq assembly accession:
GCF_000190715.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
ADID01
Assembly method:
Arachne v. 2007101641HA
Genome coverage:
8.4x
Sequencing technology:
Sanger

IDs: 276168 [UID] 248258 [GenBank] 276168 [RefSeq]

See Genome Information for Dictyostelium purpureum

There are 2 assemblies for this organism

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History (Show revision history)

Comment

URL -- http://www.jgi.doe.gov/dpurpureum
JGI Project ID: 4002612
The DNA was provided by M. Katoh, R Sucgang, G. Shaulsky, D. Queller, J. Strassman, A. Kuspa (akuspa@bcm.edu)
The organism can be obtained from the Dicty Stock Center (http://dictybase.org/StockCenter/StockCenter.html
Contacts: Richard Sucgang (rsucgang@bcm.edu)
 Igor Grigoriev (ivgrigoriev@lbl.gov)
Assembly ... and annotation done by JGI.  more

Global statistics

Total sequence length32,967,225
Total ungapped length32,851,977
Gaps between scaffolds0
Number of scaffolds799
Scaffold N5066,881
Scaffold L50156
Number of contigs1,212
Contig N5045,210
Contig L50237
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)1,212

Supplemental Content

PubMed articles for this assembly

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced32,967,22579932,851,97766,8814130
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