JCVI-TTA1-2.2

Description:: Macronuclear genome assembly
Organism name:: Tetrahymena thermophila SB210 (ciliates)
Infraspecific name:: Strain: SB210
BioSample:: SAMN02953617
BioProject:: PRJNA12564
Submitter:: TIGR
Date:: 2009/03/23
Assembly level:: Scaffold
Genome representation:: full
RefSeq category:: representative genome
GenBank assembly accession:: GCA_000189635.1 (latest)
RefSeq assembly accession:: GCF_000189635.1 (latest)
RefSeq assembly and GenBank assembly identical:: yes
WGS Project:: AAGF03
Assembly method:: Celera Assembler v. before 2009
Genome coverage:: 9.08x
Sequencing technology:: Sanger dideoxy sequencing

IDs: 246048 [UID] 246028 [GenBank] 246048 [RefSeq]

See Genome Information for Tetrahymena thermophila

Pathogen Detection Resources

There are 3 assemblies for this organism

History (Show revision history)

GenBank Assembly Accession		RefSeq Assembly Accession	Assembly Name	Assembly Level	Status
GCA_000189635.1	=	GCF_000189635.1	JCVI-TTA1-2.2	Scaffold	Latest GenBank, Latest RefSeq

Comment

The sequences of 871 contigs were updated and 781 new contigs, AAGF03000998-AAGF03001778, were added in September 2008.
Annotated scaffolds were added in March 2009.
Annotation was updated on the scaffolds in February 2014

Global statistics

Total sequence length	103,014,375
Total ungapped length	102,950,684
Gaps between scaffolds	0
Number of scaffolds	1,158
Scaffold N50	520,943
Scaffold L50	59
Number of contigs	1,778
Contig N50	367,094
Contig L50	74
Total number of chromosomes and plasmids	0
Number of component sequences (WGS or clone)	1,778

Assembly

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JCVI-TTA1-2.2

See Genome Information for Tetrahymena thermophila

Pathogen Detection Resources

There are 3 assemblies for this organism

History (Show revision history)

Comment

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