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Proterospongia_sp_ATCC50818

Organism name:
Salpingoeca rosetta (choanoflagellates)
Infraspecific name:
Strain: ATCC 50818
BioSample:
SAMN00013333
BioProject:
PRJNA37927
Submitter:
Broad Institute
Date:
2011/02/10
Assembly level:
Scaffold
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_000188695.1 (latest)
RefSeq assembly accession:
GCF_000188695.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
ACSY01
Assembly method:
Arachne HybridAssemble module
Genome coverage:
33.07x
Sequencing technology:
Sanger; 454

IDs: 244248 [UID] 244248 [GenBank] 1011758 [RefSeq]

See Genome Information for Salpingoeca rosetta

History (Show revision history)

Comment

DNA Source: Steven Faircloug - University of California, Berkeley
Annotated scaffolds were added in March 2011

Global statistics

Total sequence length55,440,309
Total assembly gap length3,736,737
Gaps between scaffolds0
Number of scaffolds154
Scaffold N501,519,553
Scaffold L5014
Number of contigs3,086
Contig N5034,760
Contig L50444
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)3,086

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced55,440,30915451,703,5721,519,5532,9320
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