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OtoGar3

Organism name:
Otolemur garnettii (small-eared galago)
Isolate:
467f Iridium
Sex:
female
BioSample:
SAMN02981229
BioProject:
PRJNA16955
Submitter:
Broad Institute of MIT and Harvard, USA, Cambridge
Date:
2011/03/16
Synonyms:
otoGar3
Assembly level:
Scaffold
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_000181295.3 (latest)
RefSeq assembly accession:
GCF_000181295.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
AAQR03
Assembly method:
ALLPATHS-LG v. R35710
Genome coverage:
137x
Sequencing technology:
Illumina GAIIx

IDs: 396188 [UID] 249878 [GenBank] 396188 [RefSeq]

See Genome Information for Otolemur garnettii

History (Show revision history)

Comment

Input coverage estimates: Fragments: 53x; Jumps: 78x; Fosmids: 6x; TOTAL: 137x

Global statistics

Total sequence length2,519,724,550
Total ungapped length2,359,530,453
Gaps between scaffolds0
Number of scaffolds7,793
Scaffold N5013,852,661
Scaffold L5047
Number of contigs200,240
Contig N5027,100
Contig L5021,634
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)200,240

Supplemental Content

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced2,519,724,5507,7932,359,530,45313,852,661192,4470
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