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ASM17649v1

Organism name:
Gardnerella vaginalis 5-1 (high GC Gram+)
Infraspecific name:
Strain: 5-1
BioSample:
SAMN02472071
BioProject:
PRJNA40895
Submitter:
Center for the Study of Biological Complexity, Virginia Commonwealth University
Date:
2010/06/04
Assembly level:
Contig
Genome representation:
full
GenBank assembly accession:
GCA_000176495.1 (latest)
RefSeq assembly accession:
GCF_000176495.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
ADAN01
Assembly method:
Newbler v. 2.0.01.14
Genome coverage:
175x
Sequencing technology:
454

IDs: 221038 [UID] 221018 [GenBank] 221038 [RefSeq]

See Genome Information for Gardnerella vaginalis

There are 104 assemblies for this organism

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History (Show revision history)

Global statistics

Total sequence length1,672,842
Total ungapped length1,672,842
Number of contigs94
Contig N50587,550
Contig L502
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)94

Supplemental Content

PubMed articles for this assembly

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Contig
Count
Ungapped
Length
Contig
N50
Spanned
Gaps
Unspanned
Gaps
unplaced1,672,842941,672,842587,55000
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