Format

Download Assemblies

Send to:

Choose Destination

ASM17093v2

Organism name:
Borreliella afzelii ACA-1 (spirochetes)
Infraspecific name:
Strain: ACA-1
BioSample:
SAMN02436235
BioProject:
PRJNA19841
Submitter:
J. Craig Venter Institute
Date:
2008/12/09
Assembly level:
Contig
Genome representation:
full
GenBank assembly accession:
GCA_000170935.2 (latest)
RefSeq assembly accession:
GCF_000170935.2 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
ABCU02

IDs: 444198 [UID] 444178 [GenBank] 444198 [RefSeq]

See Genome Information for Borreliella afzelii

There are 11 assemblies for this organism

See more

History (Show revision history)

Comment

The DNA or cells for this strains can be obtained from Sherwood Casjens (Univ. of Utah, sherwood.casjens@path.utah.edu) or Benjamin J. Luft (SUNY at Stony Brook, bluft@notes.cc.sunysb.edu)
ABCU02000001 and ABCU02000002 are contigs of the linear chromosome. The plasmids were deposited in ... GenBank Accession Numbers CP001237-CP001250  more

Global statistics

Total sequence length1,353,819
Total ungapped length1,353,819
Number of contigs16
Contig N50436,767
Contig L502
Total number of chromosomes and plasmids14
Number of component sequences (WGS or clone)16

Supplemental Content

PubMed articles for this assembly

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...

Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
Assembly Unit: Primary Assembly (GCF_000170945.2)
Molecule nameGenBank sequenceRefSeq sequenceUnlocalized
sequences count
Plasmid cp26CP001250.1=NC_011650.10
Plasmid cp32-1CP001243.1=NC_011647.10
Plasmid cp32-3CP001237.1=NC_011651.10
Plasmid cp32-4CP001240.1=NC_011649.10
Plasmid cp32-5CP001248.1=NC_011648.10
Plasmid lp17CP001239.1=NC_011789.10
Plasmid lp28-1CP001238.1=NC_011787.10
Plasmid lp28-2CP001244.1=NC_011788.10
Plasmid lp28-3CP001241.1=NC_011793.10
Plasmid lp28-4CP001249.1=NC_011791.10
Plasmid lp28-7CP001242.1=NC_011794.10
Plasmid lp32-10CP001245.1=NC_011790.10
Plasmid lp38CP001246.1=NC_011792.10
Plasmid lp54CP001247.1=NC_011786.10
unplacedn/an/an/a2

Assembly statistics

MoleculeTotal
Length
Contig
Count
Ungapped
Length
Contig
N50
Spanned
Gaps
Unspanned
Gaps
All1,353,819161,353,819436,76700
Plasmid cp2626,535126,53526,53500
Plasmid cp32-131,475131,47531,47500
Plasmid cp32-331,017131,01731,01700
Plasmid cp32-430,810130,81030,81000
Plasmid cp32-531,157131,15731,15700
Plasmid lp1726,020126,02026,02000
Plasmid lp28-128,763128,76328,76300
Plasmid lp28-232,041132,04132,04100
Plasmid lp28-323,261123,26123,26100
Plasmid lp28-430,270130,27030,27000
Plasmid lp28-733,405133,40533,40500
Plasmid lp32-1031,266131,26631,26600
Plasmid lp3833,534133,53433,53400
Plasmid lp5460,749160,74960,74900
unplaced903,5162903,516466,74900
Support Center