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ASM16685v2

Organism name:
Xylella fastidiosa subsp. sandyi Ann-1 (g-proteobacteria)
Infraspecific name:
Strain: Ann-1
BioSample:
SAMN02441076
BioProject:
PRJNA261
Submitter:
DOE Joint Genome Institute
Date:
2014/01/06
Assembly level:
Contig
Genome representation:
full
GenBank assembly accession:
GCA_000166855.2 (latest)
RefSeq assembly accession:
GCF_000166855.2 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
AAAM04
Assembly method:
ALLPATHS v. R37654
Genome coverage:
Unknown
Sequencing technology:
Sanger

IDs: 89121 [UID] 885768 [GenBank] 1080548 [RefSeq]

See Genome Information for Xylella fastidiosa

There are 55 assemblies for this organism

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History (Show revision history)

Comment

URL -- http://www.jgi.doe.gov
JGI Project ID: 16823
Source DNA and Organism available from Robert E Blankenship (Blankenship@wustl.edu)
Source DNA available from Robert E Blankenship (Blankenship@wustl.edu)
Organism available from Robert E Blankenship (Blankenship@wustl.edu)
Contacts: Robert E Blankenship (Blankenship@wustl.edu)
 Tanja Woyke (microbe@cuba.jgi-psf.org)
Whole genome sequencing and draft ... assembly at JGI-PGF
Annotation by JGI-ORNL
The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis.
(http://www.genome.gov/page.cfm?pageID=10506376)
Full annotations are available from IMG  more

Global statistics

Total sequence length2,729,755
Total ungapped length2,729,755
Number of contigs275
Contig N5044,355
Contig L5022
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)275

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Contig
Count
Ungapped
Length
Contig
N50
Spanned
Gaps
Unspanned
Gaps
unplaced2,729,7552752,729,75544,35500
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