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Ruminococus_sp_5_1_39B_FAA_V2

Organism name:
Ruminococcus sp. 5_1_39BFAA (firmicutes)
Infraspecific name:
Strain: 5_1_39BFAA
BioSample:
SAMN02463719
BioProject:
PRJNA32503
Submitter:
Broad Institute
Date:
2013/08/28
Assembly level:
Contig
Genome representation:
full
GenBank assembly accession:
GCA_000159975.2 (latest)
RefSeq assembly accession:
GCF_000159975.2 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
ACII02
Assembly method:
Newbler v. 2.1-PreRelease-4/28/2009
Genome coverage:
21.0x
Sequencing technology:
454

IDs: 54011 [UID] 765778 [GenBank] 807228 [RefSeq]

See Genome Information for Ruminococcus sp. 5_1_39BFAA

History (Show revision history)

Comment

This is a reference genome for the Human Microbiome Project. This project is co-owned with the Human Microbiome Project DACC.
Source DNA provided by Strauss, J.C., Ambrose, C., and Allen-Vercoe, E. (Molecular and Cellular Biology, University of Guelph, Guelph, Ontario, ... N1G 2W1, Canada).
Bacteria provided by Strauss, J.C., Ambrose, C., and Allen-Vercoe, E. (Molecular and Cellular Biology, University of Guelph, Guelph, Ontario, N1G 2W1, Canada). 
Please be aware that the annotation is done automatically with little or no manual curation.
Gene Calling Method: Prodigal.  more

Global statistics

Total sequence length3,930,699
Total assembly gap length0
Number of contigs3
Contig N503,112,511
Contig L501
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)3

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Contig
Count
Ungapped
Length
Contig
N50
Spanned
Gaps
Unspanned
Gaps
unplaced3,930,69933,930,6993,112,51100
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