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ASM15669v2

Organism name:
Streptomyces filamentosus NRRL 11379 (high G+C Gram-positive bacteria)
Taxonomy check:
Inconclusive
Infraspecific name:
Strain: NRRL 11379
BioSample:
SAMN02595236
BioProject:
PRJNA32281
Submitter:
Broad Institute
Date:
2014/02/21
Assembly type:
na
Assembly level:
Scaffold
Genome representation:
full
GenBank assembly accession:
GCA_000156695.2 (latest)
RefSeq assembly accession:
GCF_000156695.2 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
ABYX02
Assembly method:
Arachne v. 2008
Genome coverage:
13x
Sequencing technology:
Sanger

IDs: 188241 [UID] 1141788 [GenBank] 1356448 [RefSeq]

See Genome Information for Streptomyces filamentosus

There are 5 assemblies for this organism

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History (Show revision history)

Comment

Global statistics

Total sequence length7,851,943
Total ungapped length7,824,517
Gaps between scaffolds0
Number of scaffolds1
Scaffold N507,851,943
Scaffold L501
Number of contigs417
Contig N5070,660
Contig L5031
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)1

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced7,851,94317,824,5177,851,9434160

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Streptomyces filamentosus NRRL 11379Streptomyces filamentosus

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
GCA_014654895.1Streptomyces filamentosustype

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_008632535.1Streptomyces parvustype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared type84.4826.5923.53
Best-match type96.4277.6776.13

ANI result

Taxonomy check statusBest match statusComment
Inconclusivemismatchcoverage is less than 80%
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