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ASM15496v1

Organism name:
Streptomyces sviceus ATCC 29083 (high G+C Gram-positive bacteria)
Taxonomy check:
Inconclusive
Infraspecific name:
Strain: ATCC 29083
BioSample:
SAMN02595223
BioProject:
PRJNA28555
Submitter:
Broad Institute
Date:
2010/05/28
Assembly type:
na
Assembly level:
Chromosome
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_000154965.1 (latest)
RefSeq assembly accession:
GCF_000154965.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
ABJJ02
Assembly method:
Arachne v. April 2007
Genome coverage:
8x
Sequencing technology:
ABI

IDs: 180898 [UID] 180878 [GenBank] 180898 [RefSeq]

See Genome Information for Streptomyces sviceus

Pathogen Detection Resources

History (Show revision history)

Comment

Annotation was added to the scaffold in May 2010

Global statistics

Total sequence length9,313,494
Total ungapped length9,055,790
Gaps between scaffolds0
Number of scaffolds1
Scaffold N509,313,494
Scaffold L501
Number of contigs552
Contig N5033,523
Contig L5083
Total number of chromosomes and plasmids1
Number of component sequences (WGS or clone)552

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
Assembly Unit: Primary Assembly (GCF_000154975.1)
Molecule nameGenBank sequenceRefSeq sequence
Chromosome CM000951.1=NZ_CM000951.1

Assembly statistics

MoleculeTotal
Length		Scaffold
Count		Ungapped
Length		Scaffold
N50		Spanned
Gaps		Unspanned
Gaps
Chromosome 9,313,49419,055,7909,313,4945510

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Streptomyces sviceus ATCC 29083Streptomyces sviceus

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
no-typeno-type

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_001513955.1Streptomyces pseudovenezuelaetype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared typenanana
Best-match type93.6978.2173.67

ANI result

Taxonomy check statusBest match statusComment
Inconclusivebelow-threshold-mismatchna
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