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Dord_2.0

Organism name:
Dipodomys ordii (Ord's kangaroo rat)
Isolate:
6190
Sex:
female
BioSample:
SAMN02900551
BioProject:
PRJNA20385
Submitter:
Baylor College of Medicine
Date:
2014/12/12
Assembly level:
Scaffold
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_000151885.2 (latest)
RefSeq assembly accession:
GCF_000151885.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
ABRO02
Assembly method:
AllPaths LG v. 41070; Atlas Link v. 2.0; Atlas GapFill v. 2.0
Expected final version:
yes
Genome coverage:
181.0x Illumina; 2.5x Sanger
Sequencing technology:
Illumina; Sanger dideoxy sequencing

IDs: 234081 [UID] 1420568 [GenBank] 1833788 [RefSeq]

See Genome Information for Dipodomys ordii

History (Show revision history)

Comment

Global statistics

Total sequence length2,236,368,823
Total ungapped length2,065,314,047
Gaps between scaffolds0
Number of scaffolds65,193
Scaffold N5011,931,245
Scaffold L5056
Number of contigs148,226
Contig N5048,087
Contig L5011,373
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)148,226

Supplemental Content

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced2,236,368,82365,1932,065,314,04711,931,24583,0330
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