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Pvam_2.0

Organism name:
Pteropus vampyrus (large flying fox)
Isolate:
Shadow
Sex:
female
BioSample:
SAMN02894360
BioProject:
PRJNA20325
Submitter:
Baylor College of Medicine
Date:
2014/12/05
Assembly level:
Scaffold
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_000151845.2 (latest)
RefSeq assembly accession:
GCF_000151845.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
ABRP02
Assembly method:
AllPaths LG v. 41070; Atlas Link v. 2.0; Atlas GapFill v. 2.0
Genome coverage:
188.0x
Sequencing technology:
Illumina

IDs: 232411 [UID] 1410408 [GenBank] 1581538 [RefSeq]

See Genome Information for Pteropus vampyrus

History (Show revision history)

Comment

Global statistics

Total sequence length2,198,284,804
Total ungapped length2,017,244,498
Gaps between scaffolds0
Number of scaffolds36,094
Scaffold N505,954,017
Scaffold L50102
Number of contigs225,433
Contig N5021,866
Contig L5022,949
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)225,433

Supplemental Content

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced2,198,284,80436,0942,017,244,4985,954,017189,3390
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