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MS_CBS118893

Organism name:
Nannizzia gypsea CBS 118893 (ascomycete fungi)
Infraspecific name:
Strain: CBS 118893
BioSample:
SAMN02953728
BioProject:
PRJNA20599
Submitter:
Broad Institute
Date:
2015/07/16
Release type:
minor
Assembly level:
Scaffold
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_000150975.2 (latest)
RefSeq assembly accession:
GCF_000150975.2 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
ABQE01
Assembly method:
Arachne v. April 2008
Genome coverage:
9.06X (7.94X Q>20)
Sequencing technology:
ABI 3730

IDs: 376411 [UID] 1895148 [GenBank] 3785048 [RefSeq]

See Genome Information for Nannizzia gypsea

History (Show revision history)

Comment

Annotation was added to the scaffolds in November 2010.
Annotation was added to the mitochondrial scaffold DS989840 in July 2015.

Global statistics

Total sequence length23,272,942
Total ungapped length23,115,519
Gaps between scaffolds0
Number of scaffolds19
Scaffold N503,227,799
Scaffold L503
Number of contigs319
Contig N50146,432
Contig L5049
Total number of chromosomes and plasmids1
Number of component sequences (WGS or clone)319

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
non-nuclear
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced23,249,4031823,092,6193,227,7992990
MoleculeSequence RoleTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
Mitochondrion MTAllAssembled moleculeUnlocalized scaffolds23,539023,53910122,900022,90023,539023,539101000
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