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ASM14992v1

Organism name:
Puccinia graminis f. sp. tritici CRL 75-36-700-3 (rust fungi)
Infraspecific name:
Strain: CRL 75-36-700-3
BioSample:
SAMN00013043
BioProject:
PRJNA18535
Submitter:
Broad Institute
Date:
2008/08/26
Assembly level:
Scaffold
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_000149925.1 (latest)
RefSeq assembly accession:
GCF_000149925.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
AAWC01

IDs: 173018 [UID] 173018 [GenBank] 1011698 [RefSeq]

See Genome Information for Puccinia graminis

There are 5 assemblies for this organism

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History (Show revision history)

Comment

Annotation was added to the scaffolds in October 2010
Annotation was updated on the scaffolds in February 2012.
Please be aware that the annotation is done automatically with little or no manual curation

Global statistics

Total sequence length88,724,376
Total ungapped length81,600,488
Gaps between scaffolds0
Number of scaffolds393
Scaffold N50964,966
Scaffold L5030
Number of contigs4,563
Contig N5039,493
Contig L50557
Total number of chromosomes and plasmids1
Number of component sequences (WGS or clone)4,563

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
non-nuclear
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced88,644,62839281,521,292964,9664,1650
MoleculeSequence RoleTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
Mitochondrion MTAllAssembled moleculeUnlocalized scaffolds79,748079,74810179,196079,19679,748079,748505000
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