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ASM14920v2

Organism name:
Aspergillus nidulans FGSC A4 (ascomycete fungi)
Infraspecific name:
Strain: FGSC A4
BioSample:
SAMN02953587
BioProject:
PRJNA130
Submitter:
Broad Institute
Date:
2012/03/01
Release type:
Minor
Assembly level:
Scaffold
Genome representation:
full
Excluded from RefSeq:
  • superseded by newer assembly for species
GenBank assembly accession:
GCA_000149205.2 (latest)
RefSeq assembly accession:
GCF_000149205.2 (suppressed)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
AACD01

IDs: 67121 [UID] 792938 [GenBank] 5930698 [RefSeq]

See Genome Information for Aspergillus nidulans

There are 4 assemblies for this organism

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History (Show revision history)

Comment

Global statistics

Total sequence length30,275,969
Total ungapped length30,101,741
Gaps between scaffolds0
Number of scaffolds91
Scaffold N502,478,513
Scaffold L505
Number of contigs249
Contig N50282,268
Contig L5034
Total number of chromosomes and plasmids9
Number of component sequences (WGS or clone)249

Supplemental Content

PubMed articles for this assembly

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
non-nuclear
Assembly Unit: Primary Assembly (GCA_000149215.1)
Molecule nameGenBank sequenceRefSeq sequenceUnlocalized
sequences count
Chromosome In/an/an/a3
Chromosome IIn/an/an/a2
Chromosome IIIn/an/an/a4
Chromosome IVn/an/an/a3
Chromosome Vn/an/an/a1
Chromosome VIn/an/an/a1
Chromosome VIIn/an/an/a2
Chromosome VIIIn/an/an/a2
unplacedn/an/an/a72

Assembly statistics

MoleculeSequence RoleTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
AllAssembled molecule30,242,7429030,068,5142,478,5131580
Chromosome IAllAssembled moleculeUnlocalized scaffolds3,691,20703,691,2073033,673,84103,673,8412,200,80002,200,80016016000
Chromosome IIAllAssembled moleculeUnlocalized scaffolds3,963,65103,963,6512023,943,18503,943,1852,569,33702,569,33723023000
Chromosome IIIAllAssembled moleculeUnlocalized scaffolds3,413,87503,413,8754043,385,13203,385,1322,478,51302,478,51319019000
Chromosome IVAllAssembled moleculeUnlocalized scaffolds3,393,36503,393,3653033,384,69803,384,6981,389,55701,389,55716016000
Chromosome VAllAssembled moleculeUnlocalized scaffolds2,216,58502,216,5851012,208,57102,208,5712,216,58502,216,58511011000
Chromosome VIAllAssembled moleculeUnlocalized scaffolds2,779,12502,779,1251012,773,38902,773,3892,779,12502,779,12514014000
Chromosome VIIAllAssembled moleculeUnlocalized scaffolds4,442,83404,442,8342024,412,19704,412,1973,849,74603,849,74625025000
Chromosome VIIIAllAssembled moleculeUnlocalized scaffolds4,866,36504,866,3652024,849,23704,849,2374,306,25104,306,25122022000
unplacedAssembled molecule1,475,735721,438,264957,105120
MoleculeTotal
Length
Mitochondrion MT33,227
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