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ASM2700v1

Organism name:
Komagataella phaffii GS115 (budding yeasts)
Infraspecific name:
Strain: GS115
BioSample:
SAMEA2272385
BioProject:
PRJEA37871
Submitter:
Unit for Molecular Glycobiology, Department for Molecular Biomedical Research, VIB, UGent, Belgium
Date:
2009/05/25
Assembly level:
Chromosome
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_000027005.1 (latest)
RefSeq assembly accession:
GCF_000027005.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes

IDs: 102048 [UID] 27808 [GenBank] 102048 [RefSeq]

See Genome Information for Komagataella phaffii

There are 135 assemblies for this organism

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History (Show revision history)

Comment

Contact: Nico Callewaert
Unit for Molecular Glycobiology
Laboratory for Protein Biochemistry and Biomolecular Engineering Department of Biochemistry, Physiology and Microbiology, UGent VIB Department for Molecular Biomedical Research, UGent Technologiepark 927, B-9052 Gent, Belgium
Tel: (32)93313630
Fax: (32)93313609
Email: nico.callewaert@dmbr.vib-UGent.be
----------- sequencing/assembly
Unit for Molecular Glycobiology
Laboratory for ... Protein Biochemistry and Biomolecular Engineering Department of Biochemistry, Physiology and Microbiology, UGent VIB Department for Molecular Biomedical Research, UGent ----------- annotation
Unit for Molecular Glycobiology
Laboratory for Protein Biochemistry and Biomolecular Engineering Department of Biochemistry, Physiology and Microbiology, UGent VIB Department for Molecular Biomedical Research, UGent 

Laboratory for Bioinformatics and Evolutionary Genomics VIB Department of Plant Systems Biology, UGent
Web site: http://bioinformatics.psb.ugent.be/
Bioinformatics Online Genome Annotation System (BOGAS): http://bioinformatics.psb.ugent.be/webtools/bogas/ -----------
* NOTE: finishing of chromosomes in process
* Final curation of the annotation in progress  more

Genome-Annotation-Data

##Genome-Annotation-Data-START##
Annotation Provider::INSDC submitter
Annotation Status::Full annotation
Annotation Pipeline::Eukaryotic Annotation Propagation Pipeline
##Genome-Annotation-Data-END##

Global statistics

Total sequence length9,216,378
Total ungapped length9,215,851
Gaps between scaffolds0
Number of scaffolds4
Scaffold N502,394,163
Scaffold L502
Number of contigs15
Contig N502,394,163
Contig L502
Total number of chromosomes and plasmids4
Number of component sequences (WGS or clone)4

Supplemental Content

PubMed articles for this assembly

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
Assembly Unit: Primary Assembly (GCF_000027015.1)
Molecule nameGenBank sequenceRefSeq sequence
Chromosome 1FN392319.1=NC_012963.1
Chromosome 2FN392320.1=NC_012964.1
Chromosome 3FN392321.1=NC_012965.1
Chromosome 4FN392322.1=NC_012966.1

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
All9,216,37849,215,8512,394,163110
Chromosome 12,798,49112,798,4912,798,49100
Chromosome 22,394,16312,394,1632,394,16300
Chromosome 32,245,42812,244,9012,245,428110
Chromosome 41,778,29611,778,2961,778,29600
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