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ASM1426v1

Organism name:
Trichodesmium erythraeum IMS101 (cyanobacteria)
Infraspecific name:
Strain: IMS101
BioSample:
SAMN02598485
BioProject:
PRJNA318
Submitter:
DOE Joint Genome Institute
Date:
2006/07/06
Assembly level:
Complete Genome
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_000014265.1 (latest)
RefSeq assembly accession:
GCF_000014265.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes

IDs: 35368 [UID] 15068 [GenBank] 35368 [RefSeq]

See Genome Information for Trichodesmium erythraeum

There are 2 assemblies for this organism

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History (Show revision history)

Comment

URL -- http://www.jgi.doe.gov
JGI Project ID: 2662189
Source DNA and bacteria available from John B. Waterbury (jwaterbury@whoi.edu)
Contacts: John B. Waterbury (jwaterbury@whoi.edu)
 Paul Richardson (microbes@cuba.jgi-psf.org)
Quality assurance done by JGI-Stanford
Annotation done by JGI-ORNL and JGI-PGF
Finishing done by JGI-LANL
Finished microbial genomes have been curated ... to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000.
The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis.
(http://www.genome.gov/page.cfm?pageID=10506376)
Additional Notes: The following regions have an unresolved number of repeat copies: 2426365-2431895, 3531561-3532440, 4808319-4799188, 5967783-5973981, 7275245-7279260.  more

Global statistics

Total sequence length7,750,108
Total assembly gap length0
Total number of chromosomes and plasmids1

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
Assembly Unit: Primary Assembly (GCF_000014275.1)
Molecule nameGenBank sequenceRefSeq sequence
Chromosome CP000393.1=NC_008312.1

Assembly statistics

MoleculeTotal
Length
Chromosome 7,750,108
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