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Organism name:
Pseudomonas aeruginosa PAO1 (g-proteobacteria)
Taxonomy check:
Infraspecific name:
Strain: PAO1
PathoGenesis Corporation
Assembly type:
Assembly level:
Complete Genome
Genome representation:
RefSeq category:
reference genome
GenBank assembly accession:
GCA_000006765.1 (latest)
RefSeq assembly accession:
GCF_000006765.1 (latest)
RefSeq assembly and GenBank assembly identical:

IDs: 28348 [UID] 7568 [GenBank] 28348 [RefSeq]

See Genome Information for Pseudomonas aeruginosa

There are 19920 assemblies for this organism

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History (Show revision history)


-----------------------------------------------------------------This represents the Sept 08, 2010 version of the continually updated, reviewed, Pseudomonas aeruginosa PAO1 genome annotation from PseudoCap (see http://www.pseudomonas.com for the latest updates and links to alternate annotations). This update includes updated base pair coordinates and new ... features. PseudoCap is coordinated by Fiona S.L. Brinkman (Simon Fraser University, Canada) and Robert E.W. Hancock (University of British Columbia, Canada) with database development by Geoff Winsor (Simon Fraser University). We welcome submission through www.pseudomonas.com of any proposed changes. 'protein name confidence' is used to rate our confidence of the accuracy of the protein name. class 1: Function experimentally demonstrated in P. aeruginosa. class 2: Function of highly similar gene experimentally demonstrated in another organism (and gene context consistent in terms of pathways its involved in, if known). class 3: Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene. class 4: Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences. ------------------------------------------------------------------  more

Global statistics

Total sequence length6,264,404
Total ungapped length6,264,404
Total number of chromosomes and plasmids1

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
Assembly Unit: Primary Assembly (GCF_000006775.1)
Molecule nameGenBank sequenceRefSeq sequence
Chromosome AE004091.2=NC_002516.2

Assembly statistics

Chromosome 6,264,404

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Pseudomonas aeruginosa PAO1Pseudomonas aeruginosa

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
GCA_008801675.1Pseudomonas aeruginosasuspected-type

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_008801675.1Pseudomonas aeruginosasuspected-type

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared type99.4797.8095.38
Best-match type99.4797.8095.38

ANI result

Taxonomy check statusBest match statusComment
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