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dvir_caf1

Organism name:
Drosophila virilis (flies)
Infraspecific name:
Strain: TSC#15010-1051.87
BioSample:
SAMN02953641
BioProject:
PRJNA12688
Submitter:
Agencourt Bioscience Corporation
Date:
2006/07/12
Synonyms:
droVir3
Assembly level:
Scaffold
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_000005245.1 (latest)
RefSeq assembly accession:
GCF_000005245.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
AANI01
Genome coverage:
8x

IDs: 6158 [UID] 303948 [GenBank] 6158 [RefSeq]

See Genome Information for Drosophila virilis

There are 3 assemblies for this organism

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History (Show revision history)

Comment

This is the CAF1 assembly of the Drosophila virilis genome. It has 8.0x coverage.
Annotation was updated in November 2015

Global statistics

Total sequence length206,026,697
Total ungapped length189,205,863
Gaps between scaffolds0
Number of scaffolds13,530
Scaffold N5010,161,210
Scaffold L506
Number of contigs18,382
Contig N50120,091
Contig L50389
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)18,402

Supplemental Content

PubMed articles for this assembly

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced206,026,69713,530189,205,86310,161,2104,8520
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