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dana_caf1

Organism name:
Drosophila ananassae (flies)
Infraspecific name:
Strain: TSC#14024-0371.13
BioSample:
SAMN02953648
BioProject:
PRJNA12651
Submitter:
Agencourt Bioscience Corporation
Date:
2006/06/30
Synonyms:
droAna3
Assembly level:
Scaffold
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_000005115.1 (latest)
RefSeq assembly accession:
GCF_000005115.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
AAPP01
Genome coverage:
8.9x

IDs: 284568 [UID] 278938 [GenBank] 284568 [RefSeq]

See Genome Information for Drosophila ananassae

There are 2 assemblies for this organism

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History (Show revision history)

Comment

This is the CAF1 assembly of the Drosophila ananassae genome. It has 8.9x coverage.
Annotation was updated in October 2015

Global statistics

Total sequence length230,993,012
Total ungapped length213,918,817
Gaps between scaffolds0
Number of scaffolds13,749
Scaffold N504,599,533
Scaffold L5010
Number of contigs20,532
Contig N5095,247
Contig L50427
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)20,550

Supplemental Content

PubMed articles for this assembly

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced230,993,01213,749213,918,8174,599,5336,7830
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