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BD_SLH14081_V1

Organism name:
Blastomyces gilchristii SLH14081 (ascomycete fungi)
Infraspecific name:
Strain: SLH14081
BioSample:
SAMN02953742
BioProject:
PRJNA29173
Submitter:
Broad Institute
Date:
2009/02/24
Release type:
minor
Assembly level:
Scaffold
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_000003855.2 (latest)
RefSeq assembly accession:
GCF_000003855.2 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
ACBU01
Assembly method:
Unknown v. Unknown
Genome coverage:
8.4x
Sequencing technology:
ABI

IDs: 114821 [UID] 938268 [GenBank] 938288 [RefSeq]

See Genome Information for Blastomyces gilchristii

History (Show revision history)

Comment

Genome Coverage: 8.45X (7.33X Q>20)
Sequencing Technology: ABI
Annotation was added to the scaffolds in June 2009.
Annotation was updated on the scaffolds in June 2015. Please be aware that the annotation is done automatically with little or no manual curation.

Global statistics

Total sequence length75,404,732
Total ungapped length74,393,771
Gaps between scaffolds0
Number of scaffolds103
Scaffold N502,435,518
Scaffold L508
Number of contigs1,794
Contig N50126,005
Contig L50164
Total number of chromosomes and plasmids1
Number of component sequences (WGS or clone)1,794

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
non-nuclear
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced75,353,94210074,342,9812,435,5181,6910
MoleculeSequence RoleTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
Mitochondrion MTAllAssembled moleculeUnlocalized scaffolds50,790050,79030350,790050,79034,670034,670000000