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ASM294v2

Organism name:
Schizosaccharomyces pombe (fission yeast)
Infraspecific name:
Strain: 972h-
BioSample:
SAMEA3138176
BioProject:
PRJNA13836
Submitter:
S. pombe European Sequencing Consortium (EUPOM)
Date:
2007/11/09
Assembly level:
Chromosome
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_000002945.2 (latest)
RefSeq assembly accession:
GCF_000002945.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes

IDs: 245818 [UID] 391418 [GenBank] 245818 [RefSeq]

See Genome Information for Schizosaccharomyces pombe

There are 2 assemblies for this organism

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History (Show revision history)

Comment

Notes:

S. pombe (fission yeast) sequence and annotation are available from: (URL, http://www.genedb.org/genedb/pombe/index.jsp) (URL, http://www.sanger.ac.uk/Projects/S_pombe/)

CDS are numbered using the following system eg SPAC5H10.01c. SP (S. pombe), A (chromosome 1), c5H10 (cosmid name), .01 (first CDS), c (complementary strand). However, clones ... may have been reorientated since the original submission, therefore the complementary strand notation may be invalid for strand inference.  more

Global statistics

Total sequence length12,591,251
Total assembly gap length400
Gaps between scaffolds0
Number of scaffolds4
Scaffold N504,539,804
Scaffold L502
Number of contigs8
Contig N502,923,134
Contig L502
Total number of chromosomes and plasmids4
Number of component sequences (WGS or clone)4

Supplemental Content

PubMed articles for this assembly

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
non-nuclear
Assembly Unit: Primary Assembly (GCF_000001135.1)
Molecule nameGenBank sequenceRefSeq sequence
Chromosome ICU329670.1=NC_003424.3
Chromosome IICU329671.1=NC_003423.3
Chromosome IIICU329672.1=NC_003421.2

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
All12,571,820312,571,4204,539,80440
Chromosome I5,579,13315,579,0335,579,13310
Chromosome II4,539,80414,539,6044,539,80420
Chromosome III2,452,88312,452,7832,452,88310
MoleculeTotal
Length
Mitochondrion MT19,431
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