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OLEA9

Organism name:
Olea europaea subsp. europaea (common olive)
Infraspecific name:
Cultivar: Farga
BioSample:
SAMEA2250784
BioProject:
PRJEB35540
Submitter:
CNAG
Date:
2020/11/20
Assembly level:
Chromosome
Genome representation:
full
GenBank assembly accession:
GCA_902713445.1 (latest)
RefSeq assembly accession:
n/a
RefSeq assembly and GenBank assembly identical:
n/a
WGS Project:
CACTIH01
Genome coverage:
380x

IDs: 8697101 [UID] 23603328 [GenBank]

See Genome Information for Olea europaea

There are 3 assemblies for this organism

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History (Show revision history)

Comment

Global statistics

Total sequence length1,316,676,700
Total ungapped length1,262,900,291
Gaps between scaffolds0
Number of scaffolds9,753
Scaffold N50734,380
Scaffold L50162
Number of contigs37,715
Contig N5088,119
Contig L504,288
Total number of chromosomes and plasmids25
Number of component sequences (WGS or clone)10,839

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
non-nuclear
Assembly Unit: Primary Assembly (GCA_902713444.1)
Molecule nameGenBank sequenceRefSeq sequenceUnlocalized
sequences count
Chromosome 1LR743777.1n/an/a0
Chromosome 2LR743778.1n/an/a0
Chromosome 3LR743779.1n/an/a0
Chromosome 4LR743780.1n/an/a0
Chromosome 5LR743781.1n/an/a0
Chromosome 6LR743782.1n/an/a0
Chromosome 7LR743783.1n/an/a0
Chromosome 8LR743784.1n/an/a0
Chromosome 9LR743785.1n/an/a0
Chromosome 10LR743786.1n/an/a0
Chromosome 11LR743787.1n/an/a0
Chromosome 12LR743788.1n/an/a0
Chromosome 13LR743789.1n/an/a0
Chromosome 14LR743790.1n/an/a0
Chromosome 15LR743791.1n/an/a0
Chromosome 16LR743792.1n/an/a0
Chromosome 17LR743793.1n/an/a0
Chromosome 18LR743794.1n/an/a0
Chromosome 19LR743795.1n/an/a0
Chromosome 20LR743796.1n/an/a0
Chromosome 21LR743797.1n/an/a0
Chromosome 22LR743798.1n/an/a0
Chromosome 23LR743799.1n/an/a0
unplacedn/an/an/a9,728

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
All1,315,765,4709,7511,261,989,061734,38027,9620
Chromosome 135,723,741134,466,56135,723,7417330
Chromosome 236,438,822135,203,41236,438,8227340
Chromosome 333,160,987132,046,00333,160,9877120
Chromosome 431,371,620130,405,10431,371,6206210
Chromosome 532,452,089131,398,72232,452,0896950
Chromosome 631,040,477130,033,84931,040,4775670
Chromosome 722,738,955121,865,54422,738,9555180
Chromosome 820,413,879119,718,19320,413,8794390
Chromosome 921,759,680121,042,76621,759,6805040
Chromosome 1021,573,661120,811,21921,573,6614910
Chromosome 1129,150,913128,242,98229,150,9135680
Chromosome 1225,228,888124,353,66625,228,8885430
Chromosome 1320,414,066119,589,99220,414,0664460
Chromosome 1422,133,348121,345,90322,133,3484780
Chromosome 1521,327,580120,566,58821,327,5804760
Chromosome 1615,957,525115,444,83015,957,5252980
Chromosome 1717,977,837117,263,76517,977,8374200
Chromosome 1818,084,654117,497,49318,084,6543870
Chromosome 1919,489,178118,808,68819,489,1783900
Chromosome 2013,765,474113,247,25413,765,4743100
Chromosome 2113,396,637112,937,63813,396,6372940
Chromosome 2210,687,363110,344,70110,687,3632010
Chromosome 236,296,43916,116,2256,296,4391320
unplaced795,181,6579,728759,237,963329,35517,0050
MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
All911,2302911,230755,57200
Mitochondrion Mt755,5721755,572755,57200
Plastid Pt155,6581155,658155,65800
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