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8113_7#22

Organism name:
Streptococcus pyogenes (firmicutes)
Taxonomy check:
OK
Infraspecific name:
Strain: 31128V6S1
BioSample:
SAMEA1523493
BioProject:
PRJEB2839
Submitter:
SC
Date:
2019/04/11
Assembly type:
na
Assembly level:
Contig
Genome representation:
full
GenBank assembly accession:
GCA_900988265.1 (latest)
RefSeq assembly accession:
GCF_900988265.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
CAAICA01
Genome coverage:
100x

IDs: 2569751 [UID] 9315978 [GenBank] 9359938 [RefSeq]

See Genome Information for Streptococcus pyogenes

Pathogen Detection Resources

There are 23519 assemblies for this organism

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History (Show revision history)

Comment

Global statistics

Total sequence length1,795,090
Total ungapped length1,795,090
Number of contigs25
Contig N50239,904
Contig L503
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)25

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length		Contig
Count		Ungapped
Length		Contig
N50		Spanned
Gaps		Unspanned
Gaps
unplaced1,795,090251,795,090239,90400

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Streptococcus pyogenesStreptococcus pyogenes

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
GCA_002055535.1Streptococcus pyogenestype

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_002055535.1Streptococcus pyogenestype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared type98.8692.2886.50
Best-match type98.8692.2886.50

ANI result

Taxonomy check statusBest match statusComment
OKspecies-matchna