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8898_3#65

Organism name:
Streptococcus pyogenes (firmicutes)
Taxonomy check:
OK
Infraspecific name:
Strain: K8492
BioSample:
SAMEA1711594
BioProject:
PRJEB3313
Submitter:
SC
Date:
2019/04/11
Assembly type:
na
Assembly level:
Contig
Genome representation:
full
GenBank assembly accession:
GCA_900985965.1 (latest)
RefSeq assembly accession:
GCF_900985965.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
CAAHTJ01
Genome coverage:
100x

IDs: 2567511 [UID] 9311498 [GenBank] 9364138 [RefSeq]

See Genome Information for Streptococcus pyogenes

There are 23527 assemblies for this organism

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History (Show revision history)

Comment

Global statistics

Total sequence length1,770,590
Total ungapped length1,770,590
Number of contigs15
Contig N50239,415
Contig L504
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)15

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Contig
Count
Ungapped
Length
Contig
N50
Spanned
Gaps
Unspanned
Gaps
unplaced1,770,590151,770,590239,41500

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Streptococcus pyogenesStreptococcus pyogenes

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
GCA_002055535.1Streptococcus pyogenestype

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_002055535.1Streptococcus pyogenestype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared type98.9492.0785.13
Best-match type98.9492.0785.13

ANI result

Taxonomy check statusBest match statusComment
OKspecies-matchna