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56772_F02

Organism name:
Kaistella jeonii (CFB group bacteria)
Taxonomy check:
OK
Infraspecific name:
Strain: NCTC13459
BioSample:
SAMEA104167194
BioProject:
PRJEB6403
Submitter:
SC
Date:
2018/12/20
Assembly type:
na
Assembly level:
Complete Genome
Genome representation:
full
RefSeq category:
representative genome
Relation to type material:
assembly from type material
GenBank assembly accession:
GCA_900638245.1 (latest)
RefSeq assembly accession:
GCF_900638245.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
Genome coverage:
100x

IDs: 2181141 [UID] 8124638 [GenBank] 8151318 [RefSeq]

See Genome Information for Kaistella jeonii

There are 3 assemblies for this organism

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History (Show revision history)

Comment

Genome-Annotation-Data

##Genome-Annotation-Data-START##
Annotation Provider::NCBI RefSeq
Annotation Date::10/06/2022 01:29:19
Annotation Pipeline::NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
Annotation Method::Best-placed reference protein set; GeneMarkS-2+
Annotation Software revision::6.3
Features Annotated::Gene; CDS; rRNA; tRNA; ncRNA; repeat_region
Genes (total)::3,040
CDSs (total)::2,992
Genes (coding)::2,981
CDSs (with protein)::2,981
Genes (RNA)::48
rRNAs::2, 2, 2 (5S, 16S, 23S)
complete rRNAs::2, 2, 2 (5S, 16S, 23S)
tRNAs::39
ncRNAs::3
Pseudo Genes (total)::11
CDSs (without protein)::11
Pseudo Genes (ambiguous residues)::0 of 11
Pseudo Genes (frameshifted)::4 of 11
Pseudo Genes (incomplete)::6 of 11
Pseudo Genes (internal stop)::2 of 11
Pseudo Genes (multiple problems)::1 of 11
##Genome-Annotation-Data-END##

Global statistics

Total sequence length3,288,745
Total ungapped length3,288,745
Total number of chromosomes and plasmids1

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
Assembly Unit: Primary Assembly (GCF_900638244.1)
Molecule nameGenBank sequenceRefSeq sequence
Chromosome LR134503.1=NZ_LR134503.1

Assembly statistics

MoleculeTotal
Length
Chromosome 3,288,745

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Kaistella jeoniiKaistella jeonii

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
GCA_900112115.1Kaistella jeoniitype

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_900112115.1Kaistella jeoniitype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared type100.0098.8699.98
Best-match type100.0098.8699.98

ANI result

Taxonomy check statusBest match statusComment
OKspecies-matchna
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