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43874_A01

Organism name:
Staphylococcus schweitzeri (firmicutes)
Taxonomy check:
OK
Infraspecific name:
Strain: NCTC13712
BioSample:
SAMEA3724095
BioProject:
PRJEB6403
Submitter:
SC
Date:
2018/12/20
Assembly type:
na
Assembly level:
Complete Genome
Genome representation:
full
RefSeq category:
representative genome
Relation to type material:
assembly from type material
GenBank assembly accession:
GCA_900636685.1 (latest)
RefSeq assembly accession:
GCF_900636685.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
Genome coverage:
100x

IDs: 2179771 [UID] 8121888 [GenBank] 8155018 [RefSeq]

See Genome Information for Staphylococcus schweitzeri

There are 9 assemblies for this organism

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History (Show revision history)

Comment

Genome-Annotation-Data

##Genome-Annotation-Data-START##
Annotation Provider::NCBI RefSeq
Annotation Date::12/14/2020 13:19:48
Annotation Pipeline::NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
Annotation Method::Best-placed reference protein set; GeneMarkS-2+
Annotation Software revision::5.0
Features Annotated::Gene; CDS; rRNA; tRNA; ncRNA; repeat_region
Genes (total)::2,672
CDSs (total)::2,589
Genes (coding)::2,553
CDSs (with protein)::2,553
Genes (RNA)::83
rRNAs::7, 6, 6 (5S, 16S, 23S)
complete rRNAs::7, 6, 6 (5S, 16S, 23S)
tRNAs::60
ncRNAs::4
Pseudo Genes (total)::36
CDSs (without protein)::36
Pseudo Genes (ambiguous residues)::0 of 36
Pseudo Genes (frameshifted)::14 of 36
Pseudo Genes (incomplete)::20 of 36
Pseudo Genes (internal stop)::13 of 36
Pseudo Genes (multiple problems)::8 of 36
##Genome-Annotation-Data-END##

Global statistics

Total sequence length2,784,939
Total ungapped length2,784,939
Total number of chromosomes and plasmids1

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
Assembly Unit: Primary Assembly (GCF_900636684.1)
Molecule nameGenBank sequenceRefSeq sequence
Chromosome LR134304.1=NZ_LR134304.1

Assembly statistics

MoleculeTotal
Length
Chromosome 2,784,939

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Staphylococcus schweitzeriStaphylococcus schweitzeri

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
GCA_014877095.1Staphylococcus schweitzeritype

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_014877095.1Staphylococcus schweitzeritype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared type99.9998.4698.83
Best-match type99.9998.4698.83

ANI result

Taxonomy check statusBest match statusComment
OKspecies-matchna
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