U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Download Assembly



Try the new Datasets Genome page

28193_H01

Organism name:
Leminorella richardii (enterobacteria)
Taxonomy check:
OK
Infraspecific name:
Strain: NCTC12151
BioSample:
SAMEA2548145
BioProject:
PRJEB6403
Submitter:
SC
Date:
2018/06/17
Assembly type:
na
Assembly level:
Complete Genome
Genome representation:
full
RefSeq category:
representative genome
Relation to type material:
assembly from type material
GenBank assembly accession:
GCA_900478135.1 (latest)
RefSeq assembly accession:
GCF_900478135.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
Genome coverage:
108x

IDs: 1770091 [UID] 6710248 [GenBank] 6726298 [RefSeq]

See Genome Information for Leminorella richardii

There are 2 assemblies for this organism

See more

History (Show revision history)

Comment

Genome-Annotation-Data

##Genome-Annotation-Data-START##
Annotation Provider::NCBI RefSeq
Annotation Date::03/22/2022 03:16:33
Annotation Pipeline::NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
Annotation Method::Best-placed reference protein set; GeneMarkS-2+
Annotation Software revision::6.0
Features Annotated::Gene; CDS; rRNA; tRNA; ncRNA; repeat_region
Genes (total)::3,610
CDSs (total)::3,514
Genes (coding)::3,401
CDSs (with protein)::3,401
Genes (RNA)::96
rRNAs::8, 7, 7 (5S, 16S, 23S)
complete rRNAs::8, 7, 7 (5S, 16S, 23S)
tRNAs::69
ncRNAs::5
Pseudo Genes (total)::113
CDSs (without protein)::113
Pseudo Genes (ambiguous residues)::0 of 113
Pseudo Genes (frameshifted)::92 of 113
Pseudo Genes (incomplete)::25 of 113
Pseudo Genes (internal stop)::8 of 113
Pseudo Genes (multiple problems)::10 of 113
CRISPR Arrays::2
##Genome-Annotation-Data-END##

Global statistics

Total sequence length3,976,274
Total ungapped length3,976,274
Total number of chromosomes and plasmids1

Supplemental Content

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...

Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
Assembly Unit: Primary Assembly (GCF_900478134.1)
Molecule nameGenBank sequenceRefSeq sequence
Chromosome 1LS483470.1=NZ_LS483470.1

Assembly statistics

MoleculeTotal
Length
Chromosome 13,976,274

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Leminorella richardiiLeminorella richardii

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
samena

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_900706845.1Leminorella grimontiitype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared typenanana
Best-match type83.7253.1148.93

ANI result

Taxonomy check statusBest match statusComment
OKbelow-threshold-mismatchAssembly is the type-strain, mismatch is within genus and expected
Support Center