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57800_A01

Organism name:
Aliarcobacter skirrowii (e-proteobacteria)
Taxonomy check:
OK
Infraspecific name:
Strain: NCTC12713
BioSample:
SAMEA104224806
BioProject:
PRJEB6403
Submitter:
SC
Date:
2018/08/07
Assembly type:
na
Assembly level:
Contig
Genome representation:
full
Relation to type material:
assembly from type material
GenBank assembly accession:
GCA_900445295.1 (latest)
RefSeq assembly accession:
GCF_900445295.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
UIGC01
Genome coverage:
100x

IDs: 1857791 [UID] 7041618 [GenBank] 7050868 [RefSeq]

See Genome Information for Aliarcobacter skirrowii

Pathogen Detection Resources

There are 40 assemblies for this organism

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History (Show revision history)

Comment

Global statistics

Total sequence length1,973,136
Total ungapped length1,973,136
Number of contigs4
Contig N501,222,315
Contig L501
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)4

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length		Contig
Count		Ungapped
Length		Contig
N50		Spanned
Gaps		Unspanned
Gaps
unplaced1,973,13641,973,1361,222,31500

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Aliarcobacter skirrowiiAliarcobacter skirrowii

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
GCA_003544835.1Aliarcobacter skirrowii CCUG 10374type

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_003544835.1Aliarcobacter skirrowiitype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared type99.9999.7099.87
Best-match type99.9999.7099.87

ANI result

Taxonomy check statusBest match statusComment
OKspecies-matchna