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Source database (GenBank or RefSeq) File type

fAnaTes1.2

This assembly has been replaced. See current version

Organism name:

Anabas testudineus (climbing perch)

Sex:

male

BioSample:

SAMEA104026376

BioProject:

PRJEB25768

Submitter:

Date:

2018/12/19

Assembly type:

haploid (principal pseudohaplotype of diploid)

Assembly level:

Chromosome

Genome representation:

full

RefSeq category:

representative genome

GenBank assembly accession:

GCA_900324465.2 (replaced)

RefSeq assembly accession:

GCF_900324465.2 (latest)

RefSeq assembly and GenBank assembly identical:

no (hide details)

Only in RefSeq: chromosome MT

Data displayed for RefSeq version

WGS Project:

OOHO02

Genome coverage:

68x

Linked assembly:

GCA_900650485.1 (alternate pseudohaplotype of diploid)

IDs: 2182321 [UID] 8127028 [GenBank] 18336318 [RefSeq]

See Genome Information for Anabas testudineus

Pathogen Detection Resources

There are 3 assemblies for this organism

History (Show revision history)

GenBank Assembly Accession		RefSeq Assembly Accession	Assembly Name	Assembly Level	Status
GCA_900324465.3	n/a	n/a	fAnaTes1.3	Chromosome	Latest GenBank
GCA_900324465.2	≠	GCF_900324465.2	fAnaTes1.2	Chromosome	Latest RefSeq, Replaced GenBank
GCA_900324465.1	≠	GCF_900324465.1	fAnaTes1.1	Scaffold	Replaced GenBank, Replaced RefSeq

Comment

Assembly name: fAnaTes1.2
The genomic sequence for this RefSeq record is from the whole-genome assembly released by the SC on 2018/12/19. The original whole-genome shotgun project has the accession OOHO00000000.2.

Global statistics

Total sequence length	555,658,001
Total ungapped length	552,051,505
Gaps between scaffolds	0
Number of scaffolds	51
Scaffold N50	25,063,394
Scaffold L50	10
Number of contigs	317
Contig N50	7,055,436
Contig L50	25
Total number of chromosomes and plasmids	24
Number of component sequences (WGS or clone)	51

Molecule name	GenBank sequence		RefSeq sequence	Unlocalized sequences count
Chromosome 1	LR132051.1	=	NC_046610.1	0
Chromosome 2	LR132053.1	=	NC_046611.1	0
Chromosome 3	LR132036.1	=	NC_046612.1	0
Chromosome 4	LR132043.1	=	NC_046613.1	0
Chromosome 5	LR132035.1	=	NC_046614.1	0
Chromosome 6	LR132047.1	=	NC_046615.1	0
Chromosome 7	LR132050.1	=	NC_046616.1	0
Chromosome 8	LR132046.1	=	NC_046617.1	0
Chromosome 9	LR132038.1	=	NC_046618.1	0
Chromosome 10	LR132037.1	=	NC_046619.1	0
Chromosome 11	LR132045.1	=	NC_046620.1	0
Chromosome 12	LR132041.1	=	NC_046621.1	0
Chromosome 13	LR132048.1	=	NC_046622.1	0
Chromosome 14	LR132054.1	=	NC_046623.1	0
Chromosome 15	LR132040.1	=	NC_046624.1	0
Chromosome 16	LR132055.1	=	NC_046625.1	0
Chromosome 17	LR132052.1	=	NC_046626.1	0
Chromosome 18	LR132042.1	=	NC_046627.1	0
Chromosome 19	LR132049.1	=	NC_046628.1	0
Chromosome 21	LR132057.1	=	NC_046629.1	0
Chromosome 22	LR132056.1	=	NC_046630.1	0
Chromosome 23	LR132044.1	=	NC_046631.1	0
Chromosome 24	LR132039.1	=	NC_046632.1	0
unplaced	n/a	n/a	n/a	27

Molecule	Total Length	Scaffold Count	Ungapped Length	Scaffold N50	Spanned Gaps
All	555,641,398	50	552,034,902	25,063,394	266
Chromosome 1	27,357,120	1	27,279,964	27,357,120	12
Chromosome 2	34,285,027	1	34,217,754	34,285,027	12
Chromosome 3	27,937,778	1	27,937,403	27,937,778	6
Chromosome 4	26,090,302	1	25,664,836	26,090,302	16
Chromosome 5	26,719,370	1	26,717,469	26,719,370	19
Chromosome 6	25,063,394	1	24,858,012	25,063,394	9
Chromosome 7	25,106,443	1	25,106,192	25,106,443	7
Chromosome 8	21,832,553	1	21,832,202	21,832,553	5
Chromosome 9	28,519,589	1	28,337,026	28,519,589	9
Chromosome 10	23,456,640	1	23,374,243	23,456,640	13
Chromosome 11	22,362,968	1	22,340,132	22,362,968	18
Chromosome 12	19,394,341	1	19,394,090	19,394,341	4
Chromosome 13	25,912,841	1	25,911,586	25,912,841	10
Chromosome 14	19,875,000	1	19,874,625	19,875,000	6
Chromosome 15	21,921,250	1	21,802,728	21,921,250	12
Chromosome 16	24,434,175	1	24,360,153	24,434,175	11
Chromosome 17	23,416,631	1	23,415,391	23,416,631	15
Chromosome 18	31,080,915	1	29,370,648	31,080,915	41
Chromosome 19	18,693,732	1	18,693,156	18,693,732	8
Chromosome 21	24,496,341	1	24,012,848	24,496,341	10
Chromosome 22	20,982,477	1	20,931,723	20,982,477	9
Chromosome 23	15,359,112	1	15,267,283	15,359,112	5
Chromosome 24	19,933,469	1	19,925,508	19,933,469	9
unplaced	1,409,930	27	1,409,930	62,343	0

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fAnaTes1.2

See Genome Information for Anabas testudineus

Pathogen Detection Resources

There are 3 assemblies for this organism

History (Show revision history)

Comment

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Assembly Unit Name
Primary Assembly
non-nuclear