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IMG-taxon 2721755863 annotated assembly

Organism name:
Arsukibacterium tuosuense (g-proteobacteria)
Taxonomy check:
OK
Infraspecific name:
Strain: CGMCC 1.12461
BioSample:
SAMN06297280
BioProject:
PRJEB22426
Submitter:
DOE - JOINT GENOME INSTITUTE
Date:
2017/09/28
Assembly type:
na
Assembly level:
Contig
Genome representation:
full
RefSeq category:
representative genome
Relation to type material:
assembly from type material
GenBank assembly accession:
GCA_900215315.1 (latest)
RefSeq assembly accession:
GCF_900215315.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
OBEB01
Genome coverage:
269x

IDs: 1284101 [UID] 5213598 [GenBank] 5299938 [RefSeq]

See Genome Information for Arsukibacterium tuosuense

There are 2 assemblies for this organism

See more

History (Show revision history)

Comment

Global statistics

Total sequence length4,021,573
Total ungapped length4,021,573
Number of contigs16
Contig N50433,207
Contig L504
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)16

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Contig
Count
Ungapped
Length
Contig
N50
Spanned
Gaps
Unspanned
Gaps
unplaced4,021,573164,021,573433,20700

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Arsukibacterium tuosuenseArsukibacterium tuosuense

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
samena

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_000382165.1Arsukibacterium perlucidumtype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared typenanana
Best-match type86.0170.2270.64

ANI result

Taxonomy check statusBest match statusComment
OKbelow-threshold-mismatchAssembly is the type-strain, mismatch is within genus and expected