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IMG-taxon 2724679704 annotated assembly

Organism name:
Halorubrum ezzemoulense (euryarchaeotes)
Taxonomy check:
OK
Infraspecific name:
Strain: DSM 19316
BioSample:
SAMN06266787
BioProject:
PRJEB21388
Submitter:
DOE - JOINT GENOME INSTITUTE
Date:
2017/07/16
Assembly type:
na
Assembly level:
Contig
Genome representation:
full
Relation to type material:
assembly from synonym type material
GenBank assembly accession:
GCA_900188075.1 (latest)
RefSeq assembly accession:
GCF_900188075.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
FZNK01
Genome coverage:
151x

IDs: 1154591 [UID] 4720578 [GenBank] 4788448 [RefSeq]

See Genome Information for Halorubrum ezzemoulense

There are 47 assemblies for this organism

See more

History (Show revision history)

Comment

Global statistics

Total sequence length3,666,854
Total ungapped length3,666,854
Number of contigs49
Contig N50606,763
Contig L502
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)49

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Contig
Count
Ungapped
Length
Contig
N50
Spanned
Gaps
Unspanned
Gaps
unplaced3,666,854493,666,854606,76300

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Halorubrum ezzemoulenseHalorubrum ezzemoulense

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
GCA_000421805.1Halorubrum ezzemoulense DSM 17463type

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_000421805.1Halorubrum ezzemoulensetype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared type99.1082.2383.96
Best-match type99.1082.2383.96

ANI result

Taxonomy check statusBest match statusComment
OKspecies-matchna