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Source database (GenBank or RefSeq) File type

8403_8#76

Organism name:: Shigella sonnei (enterobacteria)
Taxonomy check:: OK
Infraspecific name:: Strain: sh1460
BioSample:: SAMEA954713
BioProject:: PRJEB2846
Submitter:: SC
Date:: 2017/02/08
Assembly type:: na
Assembly level:: Scaffold
Genome representation:: full
GenBank assembly accession:: GCA_900163485.1 (latest)
RefSeq assembly accession:: GCF_900163485.1 (latest)
RefSeq assembly and GenBank assembly identical:: yes
WGS Project:: FUGH01
Genome coverage:: 100x

IDs: 1003161 [UID] 4119758 [GenBank] 4140218 [RefSeq]

See Genome Information for Shigella sonnei

Pathogen Detection Resources

There are 17817 assemblies for this organism

History (Show revision history)

GenBank Assembly Accession		RefSeq Assembly Accession	Assembly Name	Assembly Level	Status
GCA_900163485.1	=	GCF_900163485.1	8403_8#76	Scaffold	Latest GenBank, Latest RefSeq

Comment

Global statistics

Total sequence length	4,646,034
Total ungapped length	4,645,833
Gaps between scaffolds	0
Number of scaffolds	370
Scaffold N50	28,208
Scaffold L50	49
Number of contigs	372
Contig N50	28,208
Contig L50	49
Total number of chromosomes and plasmids	0
Number of component sequences (WGS or clone)	370

	ANI	Query coverage	Subject coverage
Declared type	99.98	97.44	90.64
Best-match type	99.98	97.44	90.64

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8403_8#76

See Genome Information for Shigella sonnei

Pathogen Detection Resources

There are 17817 assemblies for this organism

History (Show revision history)

Comment

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