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ASM90015699v1

Organism name:
Elizabethkingia anophelis (CFB group bacteria)
Taxonomy check:
OK
Isolate:
Illumina sequencing of Elizabethkingia anophelis CIP111067
BioSample:
SAMEA50774668
BioProject:
PRJEB14302
Submitter:
INSTITUT PASTEUR
Date:
2017/01/20
Assembly type:
na
Assembly level:
Scaffold
Genome representation:
full
GenBank assembly accession:
GCA_900156995.1 (latest)
RefSeq assembly accession:
GCF_900156995.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
FTQZ01
Genome coverage:
130x

IDs: 1112491 [UID] 4531978 [GenBank] 4537948 [RefSeq]

See Genome Information for Elizabethkingia anophelis

Pathogen Detection Resources

There are 687 assemblies for this organism

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History (Show revision history)

Comment

Global statistics

Total sequence length3,847,345
Total ungapped length3,847,077
Gaps between scaffolds0
Number of scaffolds65
Scaffold N50135,602
Scaffold L507
Number of contigs66
Contig N50135,602
Contig L507
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)65

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Assembly Information

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length		Scaffold
Count		Ungapped
Length		Scaffold
N50		Spanned
Gaps		Unspanned
Gaps
unplaced3,847,345653,847,077135,60210

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Elizabethkingia anophelisElizabethkingia anophelis

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
GCA_000331815.1Elizabethkingia anophelis R26type

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_000331815.1Elizabethkingia anophelistype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared type98.5792.4888.22
Best-match type98.5792.4888.22

ANI result

Taxonomy check statusBest match statusComment
OKspecies-matchna