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IMG-taxon 2602042028 annotated assembly

Organism name:
Stutzerimonas balearica DSM 6083 (g-proteobacteria)
Taxonomy check:
OK
Infraspecific name:
Strain: DSM 6083
BioSample:
SAMN05660875
BioProject:
PRJEB16203
Submitter:
DOE - JOINT GENOME INSTITUTE
Date:
2016/10/21
Assembly type:
na
Assembly level:
Scaffold
Genome representation:
full
Relation to type material:
assembly from type material
GenBank assembly accession:
GCA_900103375.1 (latest)
RefSeq assembly accession:
GCF_900103375.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
FNHO01
Genome coverage:
256x

IDs: 863501 [UID] 3632318 [GenBank] 3906558 [RefSeq]

See Genome Information for Stutzerimonas balearica

Pathogen Detection Resources

There are 38 assemblies for this organism

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History (Show revision history)

Comment

Global statistics

Total sequence length4,365,123
Total ungapped length4,360,954
Gaps between scaffolds0
Number of scaffolds26
Scaffold N50465,464
Scaffold L504
Number of contigs31
Contig N50461,273
Contig L504
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)26

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length		Scaffold
Count		Ungapped
Length		Scaffold
N50		Spanned
Gaps		Unspanned
Gaps
unplaced4,365,123264,360,954465,46450

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Stutzerimonas balearica DSM 6083Stutzerimonas balearica

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
GCA_000818015.1Stutzerimonas balearica DSM 6083type

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_000818015.1Stutzerimonas balearicatype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared type99.9999.8499.32
Best-match type99.9999.8499.32

ANI result

Taxonomy check statusBest match statusComment
OKspecies-matchna