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Trpr

Organism name:
Trifolium pratense (eudicots)
Infraspecific name:
Cultivar: Milvus B
BioSample:
SAMEA3696998
BioProject:
PRJEB9186
Submitter:
TGAC
Date:
2016/04/15
Assembly level:
Chromosome
Genome representation:
full
GenBank assembly accession:
GCA_900079335.1 (latest)
RefSeq assembly accession:
n/a
RefSeq assembly and GenBank assembly identical:
n/a
WGS Project:
FKJA01
Genome coverage:
100x

IDs: 739731 [UID] 3234688 [GenBank]

See Genome Information for Trifolium pratense

There are 3 assemblies for this organism

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History (Show revision history)

Global statistics

Total sequence length345,990,850
Total ungapped length309,013,329
Gaps between scaffolds0
Number of scaffolds39,051
Scaffold N5022,682,783
Scaffold L506
Number of contigs135,023
Contig N504,845
Contig L5017,179
Total number of chromosomes and plasmids7
Number of component sequences (WGS or clone)39,913

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
Assembly Unit: Primary Assembly (GCA_900079334.1)
Molecule nameGenBank sequenceRefSeq sequenceUnlocalized
sequences count
Chromosome LG1LT555306.1n/an/a0
Chromosome LG2LT555307.1n/an/a0
Chromosome LG3LT555308.1n/an/a0
Chromosome LG4LT555309.1n/an/a0
Chromosome LG5LT555310.1n/an/a0
Chromosome LG6LT555311.1n/an/a0
Chromosome LG7LT555312.1n/an/a0
unplacedn/an/an/a39,044

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
All345,990,85039,051309,013,32922,682,78395,9720
Chromosome LG128,142,018124,714,50628,142,0186,7550
Chromosome LG232,560,536128,174,09932,560,5368,2660
Chromosome LG331,061,273127,005,99631,061,2737,7820
Chromosome LG428,907,061125,057,66328,907,0616,8420
Chromosome LG515,272,566113,024,89315,272,5663,8830
Chromosome LG622,682,783119,755,79822,682,7835,4480
Chromosome LG730,551,617126,504,46530,551,6177,5510
unplaced156,812,99639,044144,775,90971,10749,4450
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