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8525_5#67

Organism name:
Streptococcus suis (firmicutes)
Taxonomy check:
OK
Infraspecific name:
Strain: VS2923
BioSample:
SAMEA1566200
BioProject:
PRJEB2670
Submitter:
SC
Date:
2016/02/13
Assembly type:
na
Assembly level:
Contig
Genome representation:
full
GenBank assembly accession:
GCA_900049165.1 (latest)
RefSeq assembly accession:
GCF_900049165.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
FIRB01
Genome coverage:
100x

IDs: 697101 [UID] 3019418 [GenBank] 3127108 [RefSeq]

See Genome Information for Streptococcus suis

There are 6013 assemblies for this organism

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History (Show revision history)

Comment

Global statistics

Total sequence length2,131,992
Total ungapped length2,131,992
Number of contigs25
Contig N50234,161
Contig L504
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)25

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Contig
Count
Ungapped
Length
Contig
N50
Spanned
Gaps
Unspanned
Gaps
unplaced2,131,992252,131,992234,16100

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Streptococcus suisStreptococcus suis

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
GCA_000294495.1Streptococcus suis S735type

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_000294495.1Streptococcus suistype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared type99.9091.3198.28
Best-match type99.9091.3198.28

ANI result

Taxonomy check statusBest match statusComment
OKspecies-matchna