Warning: The NCBI web site requires JavaScript to function. more...

Full Report

Send to:

Choose Destination

File
Clipboard
Collections

Download Assembly

Source database (GenBank or RefSeq) File type

ASM2621240v1

Organism name:: Petrea volubilis (eudicots)
Isolate:: UF-2016
BioSample:: SAMN14559888
BioProject:: PRJNA534065
Submitter:: Michigan State University
Date:: 2022/11/18
Assembly level:: Chromosome
Genome representation:: full
RefSeq category:: representative genome
GenBank assembly accession:: GCA_026212405.1 (latest)
RefSeq assembly accession:: n/a
RefSeq assembly and GenBank assembly identical:: n/a
WGS Project:: JAOWBU01
Assembly method:: Canu v. 1.8
Expected final version:: yes
Genome coverage:: 45.0x
Sequencing technology:: PacBio Sequel

IDs: 14441161 [UID] 37466138 [GenBank]

Pathogen Detection Resources

History (Show revision history)

Comment

Global statistics

Total sequence length	480,227,434
Total ungapped length	478,835,836
Gaps between scaffolds	0
Number of scaffolds	1,095
Scaffold N50	25,555,143
Scaffold L50	9
Number of contigs	3,903
Contig N50	317,672
Contig L50	412
Total number of chromosomes and plasmids	17
Number of component sequences (WGS or clone)	1,095

Supplemental Content

Access the data

Assembly Information

Related Information

BioProject
BioProject
BioSample
BioSample
Nucleotide INSDC
Nucleotide INSDC (GenBank)
Taxonomy
Taxonomy
WGS Master
WGS Master

Recent activity

Clear Turn Off Turn On

ASM2621240v1 - Genome - Assembly - NCBI
ASM2621240v1 - Genome - Assembly - NCBI

Assembly

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...

Assembly Definition
Assembly Statistics

Global assembly definition

Download the full sequence report

Assembly Unit: Primary Assembly (GCA_026214365.1)

Molecule name	GenBank sequence		RefSeq sequence	Unlocalized sequences count
Chromosome 1	CM047870.1	n/a	n/a	0
Chromosome 2	CM047871.1	n/a	n/a	0
Chromosome 3	CM047872.1	n/a	n/a	0
Chromosome 4	CM047873.1	n/a	n/a	0
Chromosome 5	CM047874.1	n/a	n/a	0
Chromosome 6	CM047875.1	n/a	n/a	0
Chromosome 7	CM047876.1	n/a	n/a	0
Chromosome 8	CM047877.1	n/a	n/a	0
Chromosome 9	CM047878.1	n/a	n/a	0
Chromosome 10	CM047879.1	n/a	n/a	0
Chromosome 11	CM047880.1	n/a	n/a	0
Chromosome 12	CM047881.1	n/a	n/a	0
Chromosome 13	CM047882.1	n/a	n/a	0
Chromosome 14	CM047883.1	n/a	n/a	0
Chromosome 15	CM047884.1	n/a	n/a	0
Chromosome 16	CM047885.1	n/a	n/a	0
Chromosome 17	CM047886.1	n/a	n/a	0
unplaced	n/a	n/a	n/a	1,078

Assembly statistics

Primary Assembly

Molecule	Total Length	Scaffold Count	Ungapped Length	Scaffold N50	Spanned Gaps	Unspanned Gaps
All	480,227,434	1,095	478,835,836	25,555,143	2,808	0
Chromosome 1	41,825,031	1	41,699,508	41,825,031	252	0
Chromosome 2	29,177,255	1	29,086,663	29,177,255	185	0
Chromosome 3	28,013,907	1	27,933,907	28,013,907	160	0
Chromosome 4	27,236,695	1	27,152,580	27,236,695	173	0
Chromosome 5	27,216,756	1	27,121,687	27,216,756	193	0
Chromosome 6	26,750,833	1	26,662,810	26,750,833	177	0
Chromosome 7	26,429,973	1	26,332,881	26,429,973	198	0
Chromosome 8	25,990,019	1	25,907,496	25,990,019	166	0
Chromosome 9	25,555,143	1	25,473,597	25,555,143	165	0
Chromosome 10	25,146,005	1	25,065,982	25,146,005	161	0
Chromosome 11	23,911,985	1	23,841,962	23,911,985	141	0
Chromosome 12	23,873,781	1	23,814,258	23,873,781	120	0
Chromosome 13	23,849,216	1	23,773,716	23,849,216	151	0
Chromosome 14	23,594,833	1	23,522,310	23,594,833	146	0
Chromosome 15	23,452,991	1	23,385,491	23,452,991	135	0
Chromosome 16	22,542,268	1	22,468,268	22,542,268	148	0
Chromosome 17	21,811,019	1	21,752,996	21,811,019	117	0
unplaced	33,849,724	1,078	33,839,724	25,000	20	0

You are here: NCBI > Genomes & Maps > Assembly